CESSHIV-1 database

General information on HIV-1 isolate

# 636

Accession number	DQ351237
Name	03ZASK113B1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	113B1

DQ351237 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatt tctggttagt gtggaaaatc tctagcagtg gcgcccgaac agggacttga aagcgaaagt agaaccagag gagatctctc gacgcagggc 

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy