CESSHIV-1 database

General information on HIV-1 isolate

# 651

Accession number	DQ369985
Name	03ZAPS026MB1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	PS-026M

DQ369985 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccctt tgtggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacccgaa agcgaaagta agaccagagg agatctctcg acgcaggac

Isolates with identical sequences of region:

AF254706(#1494) EU293447(#1207)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy