CESSHIV-1 database

General information on HIV-1 isolate

# 2791

Accession number	EU170149
Name	luBF_10_03
Subtype	CRF42_BF
Country	Luxembourg
Sampling year	2003

EU170149 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatt ttagtccgtg tggaaaatct ctagcagtgg cgcccgaaca gggacytgaa agcgaaagta gaaccagagg agctctctcg acgcaggac

Isolates with identical sequences of region:

EU170146(#2788) EU170151(#2793)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy