CESSHIV-1 database

General information on HIV-1 isolate

# 1427

Accession number	FJ864679
Name	PokA1Ru
Subtype	A1
Country	Russia
Sampling year	2008

FJ864679 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccact ctaggcggtg ta-aaaatctc tagcagtggc gcccgaacag ggacttgaaa gcgaaagtta acagggactc gaaagcgaaa gttccagaga agttctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy