General information on HIV-1 isolate
# 3323
| Accession number |
GU595154 |
| Name | 61842 |
| Subtype | BF1 |
| Country | Italy |
| Sampling year |
2002 |
GU595154 isolate has foldings of [DIS region] [PBS region] [Core poly(A) site] [123nt 3' terminus] [USE domain, TAR, polyA] [USE region] [227nt 3' terminus] [Complete poly(A) region] [USE, TAR, polyA] .
The region encompassing PBS domainThe primary sequence:
tgttgtgtga ctctggtaac tagagatccc tcagaccatt ttagtcagtg tggaaaatct ctagcagtgg cgcccgaaca gggacgcgaa agcgaaagta gaaccagagg agatctctcg acgcaggac
Isolates with identical sequences of region:
EU735538(#1052)
GQ290462(#3201)
The optimal secondary structure:
The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy
