CESSHIV-1 database

General information on HIV-1 isolate

# 3454

Accession number	DQ287303
Name	C64_5_2000
Subtype	B
Country	Australia
Sampling year	2000
Patient	C64

DQ287303 isolate has foldings of [Core poly(A) site] [USE domain, TAR, polyA] [USE region] [Complete poly(A) region] [USE, TAR, polyA] .

The region encompassing Core poly(A) site

The primary sequence:

ctgagtctct ctggttagac cagatatgag cctgggagct ctctggctga actagggaac ccactgctta agcctcaata aagcttgcct tgagtgcttc aagtagtgtg tgcccgtctg ttgtgtgact ctggtaa

Isolates with identical sequences of region:

DQ287302(#3453)

CESSHIV-1 DATABASE

General information on HIV-1 isolate

The region encompassing Core poly(A) site

The primary sequence:

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy