CESSHIV-1 database

General information on HIV-1 isolate

# 3456

Accession number	U37269
Name	HIV1C98
Subtype	B
Country	Australia
Submitted to NCBI	1995
Patient	C98

U37269 isolate has foldings of [Core poly(A) site] [USE domain, TAR, polyA] [USE region] [Complete poly(A) region] [USE, TAR, polyA] .

The region encompassing Core poly(A) site

The primary sequence:

ctgggtctct ctggttagac cagatctgag cctgggagct ctctggctaa ctagggaacc cactgcttaa gcctcaataa agcttgcctt gagtgcttca agtagtgtgt gcccgtctgt tgtgtgactc tggtat

Isolates with identical sequences of region:

AF042106(#48) U37267(#3072)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy