CESSHIV-1 database

General information on HIV-1 isolate

# 3076

Accession number	U63537
Name	Barbosa, TYGE3
Subtype	D
Country	South Africa (Mozambique)
Sampling year	1984
Patient	Barbo

U63537 isolate has foldings of [USE domain, TAR, polyA] [USE region] [USE, TAR, polyA] .

The region encompassing USE domain, TAR, polyA

The primary sequence:

ctaaccctca gatgctgcat ataagcagct gcttttcgcc tgtactgggt ctctctggtt ggaccagatt agagcctggg agctctctgg ctagctaggg aacccactgc ttaagcctca aataaagctt gccttgagtg cttaaagtag tgt

CESSHIV-1 DATABASE

General information on HIV-1 isolate

The region encompassing USE domain, TAR, polyA

The primary sequence:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy