CESSHIV-1 database

General information on HIV-1 isolate

# 1409

Accession number	AF539406
Name	ML170_1995
Subtype	A1C
Country	Kenya
Sampling year	1995
Patient	ML170

AF539406 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc tat--ttttgac tagcggaggc tagaaggaga ga

Isolates with identical sequences of region:

AF539404(#1407) AF539405(#1408)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy