CESSHIV-1 database

General information on HIV-1 isolate

# 433

Accession number	AY901970
Name	03ZASK073B1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	SK-073

AY901970 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaaagt gcactcggca agaggcgaga g-cggcggctg gtgagtacgc caattttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

DQ275642(#1220) DQ351238(#637) EF514713(#1022)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy