CESSHIV-1 database

General information on HIV-1 isolate

# 1624

Accession number	EU047604
Name	99CSR10_3100
Subtype	B
Country	South Korea (USA)
Sampling year	1999
Patient	HP-21(CSR)

EU047604 isolate has foldings of [DIS region] [PBS region] [Core poly(A) site] [123nt 3' terminus] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagacactt ttagtcagtg tggaaaatct ctagcagtgg cgcccgaaca gggacccgaa agcgaaagga aaaccagagg agctctctcg acgcaggac

Isolates with identical sequences of region:

EU047693(#1888)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy