CESSHIV-1 database

General information on HIV-1 isolate

# 21

Accession number	U52953
Name	92BR025
Subtype	C
Country	Brazil
Sampling year	1992
Patient	BR025

U52953 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag -cggcggctgg tgagtacgcc atttttattt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

AY727525(#420) AY727527(#421) GQ365651(#3314)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy